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spades
v3.15.5
SPAdes (St. Petersburg genome assembler) is intended for both standard isolates and single-cell MDA bacteria assemblies.
SPAdes (St. Petersburg genome assembler) is a genome assembly algorithm which was designed for single cell and multi-cells bacterial data sets. However, it might not be suitable for large genomes projects.
SPAdes works with Ion Torrent, PacBio, Oxford Nanopore, and Illumina paired-end, mate-pairs and single reads
Install
pixiaddspadesmicromambainstall-c biocondaspadesVersion
Platforms
Last published
Documentation
Package Variants
| filename | version | build | Created | size | Architecture | |
|---|---|---|---|---|---|---|
spades-3.15.5-h95f258a_1.tar.bz2 | 3.15.5 | h95f258a_1 (1) | 2 years ago | 47.89 MB | | |
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spades-3.15.5-h95f258a_0.tar.bz2 | 3.15.5 | h95f258a_0 (0) | 2 years ago | 48.04 MB | | |
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spades-3.15.4-h95f258a_0.tar.bz2 | 3.15.4 | h95f258a_0 (0) | 2 years ago | 48.07 MB | | |
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spades-3.15.3-h95f258a_1.tar.bz2 | 3.15.3 | h95f258a_1 (1) | 2 years ago | 48.01 MB | | |
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spades-3.15.3-h95f258a_0.tar.bz2 | 3.15.3 | h95f258a_0 (0) | 3 years ago | 48.01 MB | | |
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spades-3.15.2-h95f258a_1.tar.bz2 | 3.15.2 | h95f258a_1 (1) | 3 years ago | 47.92 MB | | |
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spades-3.15.2-h633aebb_0.tar.bz2 | 3.15.2 | h633aebb_0 (0) | 3 years ago | 47.91 MB | | |
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spades-3.15.2-he641558_0.tar.bz2 | 3.15.2 | he641558_0 (0) | 3 years ago | 19.84 MB |  | |
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spades-3.15.0-he641558_0.tar.bz2 | 3.15.0 | he641558_0 (0) | 3 years ago | 19.89 MB | | |
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spades-3.15.0-h633aebb_0.tar.bz2 | 3.15.0 | h633aebb_0 (0) | 3 years ago | 47.87 MB | | |
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